STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_013130Uncharacterized protein. (208 aa)    
Predicted Functional Partners:
PEX7_1
Peroxisomal targeting signal 2 receptor.
    
 0.783
PEX7_2
Peroxisomal targeting signal 2 receptor.
    
 0.783
CU098_001887
Aminotran_5 domain-containing protein.
    
 0.747
NEDD8
Nedd8-conjugating enzyme UBE2F.
    
  0.668
CU098_012679
Ubiquitin-like domain-containing protein.
    
  0.668
PEX13_1
Peroxisomal membrane protein PAS20.
     
 0.667
PEX13_3
Peroxisomal membrane protein PAS20.
     
 0.667
PEX13_2
Peroxisomal membrane protein PAS20.
     
 0.667
PEX5_1
Peroxisomal membrane signal receptor PTS1.
    
 0.638
PEX5_3
Peroxisomal membrane signal receptor PTS1.
    
 0.638
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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