STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_007556Peptidase_M24 domain-containing protein. (403 aa)    
Predicted Functional Partners:
IPI3
Pre-rRNA-processing protein ipi3.
  
 
 0.990
RPL35
60S ribosomal protein L35.
  
 
 0.984
RPL5
60S ribosomal protein L5.
  
 
 0.983
RPL7
60S ribosomal protein L7.
  
 
 0.982
RLP24
ATPase-activating ribosome biosynthesis protein.
   
 
 0.981
CU098_006322
Ribosomal_L30 domain-containing protein.
  
 
 0.980
CU098_010983
RRM domain-containing protein.
   
 
 0.973
CU098_000033
Ribosomal_L16 domain-containing protein.
  
 
 0.972
PES1_1
mRNA-binding ribosome synthesis protein.
   
 
 0.972
PES1_2
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.972
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.