STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALA1Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (892 aa)    
Predicted Functional Partners:
CU098_000453
ANAPC4 domain-containing protein.
   
 0.978
CU098_004257
DOC domain-containing protein.
    
 0.977
ANAPC2
Anaphase-promoting complex subunit 2; Belongs to the cullin family.
    
 0.976
CU098_006015
RING-type domain-containing protein.
    
 0.975
CDC16_2
Anaphase promoting complex subunit cdc16.
   
 0.940
CDC16_1
Anaphase promoting complex subunit cdc16.
   
 0.940
APC1_1
Anaphase-promoting complex subunit 1.
    
 0.936
APC1_2
Anaphase-promoting complex subunit 1.
    
 0.936
CU098_009140
Protein kinase domain-containing protein.
    
 0.924
CU098_013723
BUB1 N-terminal domain-containing protein.
    
 0.924
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.