STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_011336Uncharacterized protein. (342 aa)    
Predicted Functional Partners:
SSU72
RNA polymerase II subunit A C-terminal domain phosphatase.
    
 0.790
CU098_003446
Uncharacterized protein.
    
 
 0.751
CU098_004433
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.582
CU098_004999
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.582
MEAF6
Chromatin modification-protein meaf6.
    
 
 0.566
YAF9_2
NuA4 histone H4 acetyltransferase complex and the SWR1 complex subunit.
    
   0.542
SRSF4
Serine arginine-rich splicing factor.
    
 
 0.499
EPL1
Enhancer of polycomb-like protein.
    
 
 0.497
CU098_012456
Uncharacterized protein.
     
 0.497
FIP1L1
Pre-mRNA 3-end-processing factor fip1l1.
     
 0.491
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.