STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_013219Fungal_trans domain-containing protein. (668 aa)    
Predicted Functional Partners:
SIR2
NAD-dependent histone deacetylase sir2.
    
 0.802
HHT1_1
Histone H3; Belongs to the histone H3 family.
   
 0.721
HHT1_2
Histone H3.1.
   
 0.721
HIS71
Histone H3.3 type 1.
   
 0.721
CU098_002715
Uncharacterized protein.
    
 0.709
SIRT2_2
NAD-dependent protein deacetylase sirtuin-2.
    
 0.688
SIRT2_1
NAD-dependent protein deacetylase; Belongs to the sirtuin family. Class I subfamily.
    
 0.688
CU098_000207
Uncharacterized protein.
    
 0.684
CU098_002405
GOLD domain-containing protein; Belongs to the EMP24/GP25L family.
  
 
  0.682
SIRT4_1
NAD-dependent protein lipoamidase sirtuin-4.
    
 0.661
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.