STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MUS81_2Crossover junction endonuclease mus81. (716 aa)    
Predicted Functional Partners:
CU098_010431
3'-5' exonuclease domain-containing protein.
   
 0.995
MPH1_1
3'-5' DNA helicase.
    
 0.995
CU098_004720
3'-5' exonuclease domain-containing protein.
   
 0.995
MPH1_2
3'-5' DNA helicase.
    
 0.995
SGS1
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
   
 0.986
ERCC1
Excision repair cross-complementation group 1.
   
 0.980
NRS1
Putative asparagine--tRNA ligase, cytoplasmic.
  
 0.966
CU098_006085
AA_TRNA_LIGASE_II domain-containing protein.
  
 0.966
RAD52
DNA repair protein rad52.
    
 0.945
CU098_007957
ERCC4 domain-containing protein.
    
 0.932
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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