STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_012891RF_PROK_I domain-containing protein. (385 aa)    
Predicted Functional Partners:
CU098_003874
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.964
CU098_008268
Uncharacterized protein.
  
 
 0.964
MRPL39_1
54S ribosomal protein L39, mitochondrial.
   
 
 0.959
CU098_001703
Uncharacterized protein.
  
 
 0.957
CU098_009982
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.950
RPS5_1
Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
  
 
 0.940
RPS5_2
Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
  
 
 0.940
RPL35
60S ribosomal protein L35.
   
 
 0.939
CU098_007013
RF_PROK_I domain-containing protein.
  
 
 0.932
RPS23_1
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.930
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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