Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CU098_006042 | CU098_009294 | A0A367KWS6 | A0A367JPX4 | Uncharacterized protein. | Uncharacterized protein. | 0.780 |
CU098_006042 | CU098_011094 | A0A367KWS6 | A0A367KYK7 | Uncharacterized protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.720 |
CU098_006042 | DDX20 | A0A367KWS6 | A0A367JTZ8 | Uncharacterized protein. | DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family. | 0.698 |
CU098_006042 | MPH1_1 | A0A367KWS6 | A0A367KLD7 | Uncharacterized protein. | 3'-5' DNA helicase. | 0.789 |
CU098_006042 | MPH1_2 | A0A367KWS6 | A0A367KVR1 | Uncharacterized protein. | 3'-5' DNA helicase. | 0.789 |
CU098_006042 | MUS81_1 | A0A367KWS6 | A0A367J7A8 | Uncharacterized protein. | Crossover junction endonuclease mus81. | 0.701 |
CU098_006042 | MUS81_2 | A0A367KWS6 | A0A367KWI7 | Uncharacterized protein. | Crossover junction endonuclease mus81. | 0.701 |
CU098_006042 | POL3_1 | A0A367KWS6 | A0A367KMF1 | Uncharacterized protein. | DNA polymerase. | 0.659 |
CU098_006042 | POL3_2 | A0A367KWS6 | A0A367JZW5 | Uncharacterized protein. | DNA polymerase. | 0.659 |
CU098_006042 | SMD3 | A0A367KWS6 | A0A367KP07 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D3. | 0.657 |
CU098_009294 | CU098_006042 | A0A367JPX4 | A0A367KWS6 | Uncharacterized protein. | Uncharacterized protein. | 0.780 |
CU098_009294 | POL3_1 | A0A367JPX4 | A0A367KMF1 | Uncharacterized protein. | DNA polymerase. | 0.994 |
CU098_009294 | POL3_2 | A0A367JPX4 | A0A367JZW5 | Uncharacterized protein. | DNA polymerase. | 0.994 |
CU098_011094 | CU098_006042 | A0A367KYK7 | A0A367KWS6 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Uncharacterized protein. | 0.720 |
CU098_011094 | DDX20 | A0A367KYK7 | A0A367JTZ8 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family. | 0.909 |
CU098_011094 | SMD3 | A0A367KYK7 | A0A367KP07 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Small nuclear ribonucleoprotein Sm D3. | 0.999 |
DDX20 | CU098_006042 | A0A367JTZ8 | A0A367KWS6 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.698 |
DDX20 | CU098_011094 | A0A367JTZ8 | A0A367KYK7 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.909 |
DDX20 | SMD3 | A0A367JTZ8 | A0A367KP07 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family. | Small nuclear ribonucleoprotein Sm D3. | 0.878 |
MPH1_1 | CU098_006042 | A0A367KLD7 | A0A367KWS6 | 3'-5' DNA helicase. | Uncharacterized protein. | 0.789 |
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