STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_007753Uncharacterized protein. (265 aa)    
Predicted Functional Partners:
CU098_010929
Uncharacterized protein.
   
    0.763
CU098_008106
Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.
   
    0.763
CU098_010983
RRM domain-containing protein.
   
    0.758
CU098_010059
Uncharacterized protein.
   
    0.673
CU098_013708
Uncharacterized protein.
   
    0.673
CU098_002884
Uncharacterized protein.
   
    0.661
NOP4
RNA recognition motif-containing protein.
   
    0.661
CU098_001375
Uncharacterized protein.
   
    0.644
UTP23
Small subunit processome component.
   
    0.644
RLP24
ATPase-activating ribosome biosynthesis protein.
   
    0.636
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.