STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_005951Uncharacterized protein. (488 aa)    
Predicted Functional Partners:
RBBP4
Histone-binding protein rbbp4.
   
 0.806
MSI1
Chromatin assembly complex, subunit 3.
   
 0.806
PHO85_1
Negative regulator of the PHO system; Belongs to the protein kinase superfamily.
   
 0.663
PHO85_2
Negative regulator of the PHO system; Belongs to the protein kinase superfamily.
   
 0.663
PHO85_3
Negative regulator of the PHO system; Belongs to the protein kinase superfamily.
   
 0.663
CDC2
Cell division control protein 2.
   
 0.663
CU098_009532
Protein kinase domain-containing protein.
   
 0.613
MRPL3
54S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.522
CU098_007946
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
    
 
 0.484
CU098_000990
Ribosomal_L2_C domain-containing protein.
    
 
 0.482
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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