STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_001809Uncharacterized protein. (174 aa)    
Predicted Functional Partners:
RAB7
Ras-protein Rab-7.
    
  0.840
CU098_013811
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
  0.809
VPS10_1
Vacuolar protein sorting/targeting protein PEP1.
    
 0.785
VPS10_3
Vacuolar protein sorting/targeting protein PEP1.
    
 0.785
VPS10_2
Vacuolar protein sorting/targeting protein PEP1.
    
 0.785
VPS51
Vacuolar protein sorting-associated protein 51.
     
 0.777
CU098_001794
Uncharacterized protein.
    
 
 0.740
LSB5
Putative actin patch assembly and actin polymerization protein.
    
 
 0.740
CU098_001142
Uncharacterized protein.
    
 
 0.740
CU098_012139
Uncharacterized protein.
    
 
 0.740
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
Server load: low (18%) [HD]