STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA76499.1NAD(P)H dehydrogenase (quinone). (199 aa)    
Predicted Functional Partners:
SKB07770.1
Starvation-inducible DNA-binding protein; Belongs to the Dps family.
  
  
 0.679
SKB05389.1
Kef-type potassium/proton antiporter accessory protein, CPA2 family.
    
 0.560
SKA76503.1
Probable phosphoglycerate mutase.
       0.509
SKA86720.1
Catalase.
   
  
 0.481
SKA90170.1
Hypothetical protein.
    
  0.479
SKA76981.1
Intracellular sulfur oxidation protein, DsrE/DsrF family.
    
  0.469
SKA76513.1
Thioesterase domain-containing protein, putative.
       0.466
SKB01254.1
Glycosyltransferase, GT2 family.
   
 
 0.462
SKA76508.1
Ribose 5-phosphate isomerase B.
       0.455
SKA76518.1
Hypothetical protein.
       0.455
Your Current Organism:
Prosthecobacter debontii
NCBI taxonomy Id: 48467
Other names: ATCC 700200, P. debontii, Prosthecobacter FC3, Prosthecobacter sp. FC-3, strain FC3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.