Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKA77269.1 | SKA77274.1 | SAMN02745166_00355 | SAMN02745166_00356 | Immunoglobulin domain-containing protein. | CubicO group peptidase, beta-lactamase class C family. | 0.572 |
SKA77269.1 | SKA77277.1 | SAMN02745166_00355 | SAMN02745166_00357 | Immunoglobulin domain-containing protein. | Tetratricopeptide repeat-containing protein. | 0.572 |
SKA77274.1 | SKA77269.1 | SAMN02745166_00356 | SAMN02745166_00355 | CubicO group peptidase, beta-lactamase class C family. | Immunoglobulin domain-containing protein. | 0.572 |
SKA77274.1 | SKA77277.1 | SAMN02745166_00356 | SAMN02745166_00357 | CubicO group peptidase, beta-lactamase class C family. | Tetratricopeptide repeat-containing protein. | 0.773 |
SKA77274.1 | SKA77280.1 | SAMN02745166_00356 | SAMN02745166_00358 | CubicO group peptidase, beta-lactamase class C family. | Hypothetical protein. | 0.512 |
SKA77277.1 | SKA77269.1 | SAMN02745166_00357 | SAMN02745166_00355 | Tetratricopeptide repeat-containing protein. | Immunoglobulin domain-containing protein. | 0.572 |
SKA77277.1 | SKA77274.1 | SAMN02745166_00357 | SAMN02745166_00356 | Tetratricopeptide repeat-containing protein. | CubicO group peptidase, beta-lactamase class C family. | 0.773 |
SKA77277.1 | SKA77280.1 | SAMN02745166_00357 | SAMN02745166_00358 | Tetratricopeptide repeat-containing protein. | Hypothetical protein. | 0.512 |
SKA77277.1 | SKA77643.1 | SAMN02745166_00357 | SAMN02745166_00413 | Tetratricopeptide repeat-containing protein. | Tetratricopeptide (TPR) repeat. | 0.416 |
SKA77277.1 | SKA80750.1 | SAMN02745166_00357 | SAMN02745166_00676 | Tetratricopeptide repeat-containing protein. | Adenylate cyclase, class 3. | 0.565 |
SKA77277.1 | SKA82641.1 | SAMN02745166_00357 | SAMN02745166_00942 | Tetratricopeptide repeat-containing protein. | PAS domain S-box-containing protein. | 0.520 |
SKA77277.1 | SKA96391.1 | SAMN02745166_00357 | SAMN02745166_02384 | Tetratricopeptide repeat-containing protein. | TPR repeat-containing protein. | 0.799 |
SKA77277.1 | SKA96945.1 | SAMN02745166_00357 | SAMN02745166_02502 | Tetratricopeptide repeat-containing protein. | FHA domain-containing protein. | 0.587 |
SKA77277.1 | polA | SAMN02745166_00357 | SAMN02745166_01907 | Tetratricopeptide repeat-containing protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.428 |
SKA77277.1 | ribBA | SAMN02745166_00357 | SAMN02745166_04033 | Tetratricopeptide repeat-containing protein. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.714 |
SKA77280.1 | SKA77274.1 | SAMN02745166_00358 | SAMN02745166_00356 | Hypothetical protein. | CubicO group peptidase, beta-lactamase class C family. | 0.512 |
SKA77280.1 | SKA77277.1 | SAMN02745166_00358 | SAMN02745166_00357 | Hypothetical protein. | Tetratricopeptide repeat-containing protein. | 0.512 |
SKA77643.1 | SKA77277.1 | SAMN02745166_00413 | SAMN02745166_00357 | Tetratricopeptide (TPR) repeat. | Tetratricopeptide repeat-containing protein. | 0.416 |
SKA77643.1 | SKA80750.1 | SAMN02745166_00413 | SAMN02745166_00676 | Tetratricopeptide (TPR) repeat. | Adenylate cyclase, class 3. | 0.909 |
SKA77643.1 | SKA82641.1 | SAMN02745166_00413 | SAMN02745166_00942 | Tetratricopeptide (TPR) repeat. | PAS domain S-box-containing protein. | 0.906 |
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