STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA77428.1Hypothetical protein. (232 aa)    
Predicted Functional Partners:
SKA77461.1
Cytochrome c oxidase accessory protein FixG.
 
     0.931
SKA77500.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
 
     0.806
SKA77486.1
Cytochrome c oxidase cbb3-type subunit 3.
 
     0.776
SKB04700.1
Cytochrome c oxidase cbb3-type subunit 1.
 
     0.767
SKA81104.1
Cu2+-exporting ATPase.
 
     0.735
SKA77455.1
Hypothetical protein.
       0.678
SKB04696.1
Cytochrome c oxidase cbb3-type subunit 2.
 
     0.669
SKA77472.1
ParE toxin of type II toxin-antitoxin system, parDE.
 
     0.555
SKA77468.1
Hypothetical protein.
       0.488
SKA79764.1
Hypothetical protein.
  
     0.451
Your Current Organism:
Prosthecobacter debontii
NCBI taxonomy Id: 48467
Other names: ATCC 700200, P. debontii, Prosthecobacter FC3, Prosthecobacter sp. FC-3, strain FC3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.