STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA86357.1ATPase family associated with various cellular activities (AAA). (1676 aa)    
Predicted Functional Partners:
SKA86364.1
Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain.
 
     0.894
SKA86371.1
Hypothetical protein.
 
     0.894
SKA95075.1
RDD family protein.
  
     0.657
SKB05721.1
Uncharacterized membrane protein YckC, RDD family.
  
     0.549
SKA88646.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
  
    0.532
SKB04068.1
Uncharacterized membrane protein SpoIIM, required for sporulation.
 
    0.532
SKB07123.1
Hypothetical protein.
  
     0.529
SKB04067.1
Protein of unknown function.
 
     0.526
SKB07127.1
Lipopolysaccharide kinase (Kdo/WaaP) family protein.
  
     0.500
SKB04069.1
Uncharacterized membrane protein YckC, RDD family.
  
     0.480
Your Current Organism:
Prosthecobacter debontii
NCBI taxonomy Id: 48467
Other names: ATCC 700200, P. debontii, Prosthecobacter FC3, Prosthecobacter sp. FC-3, strain FC3
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