STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA86577.1Predicted acyltransferase, LPLAT superfamily. (319 aa)    
Predicted Functional Partners:
SKA86580.1
Dehydrogenase (flavoprotein).
 
     0.848
SKA81994.1
Acyl carrier protein.
  
   
 0.754
SKB03149.1
Protein of unknown function.
  
     0.655
SKA86466.1
Methyltransferase domain-containing protein; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM). Belongs to the class I-like SAM-binding methyltransferase superfamily. Cx-SAM synthase family.
  
     0.654
SKA99264.1
Predicted exporter protein, RND superfamily.
  
     0.644
SKA96597.1
Thiamine kinase.
  
    0.638
SKB01553.1
Hypothetical protein.
  
     0.633
SKA98349.1
Dehydrogenase (flavoprotein).
  
     0.620
SKA96391.1
TPR repeat-containing protein.
    
 0.593
SKA76170.1
Vault protein inter-alpha-trypsin domain-containing protein.
  
     0.580
Your Current Organism:
Prosthecobacter debontii
NCBI taxonomy Id: 48467
Other names: ATCC 700200, P. debontii, Prosthecobacter FC3, Prosthecobacter sp. FC-3, strain FC3
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