STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA88860.1Hypothetical protein. (91 aa)    
Predicted Functional Partners:
SKA88799.1
Hypothetical protein.
       0.773
SKA88806.1
Hypothetical protein.
       0.773
SKA88815.1
Collagen triple helix repeat-containing protein.
       0.773
SKA88822.1
Hypothetical protein.
       0.773
SKA88827.1
Hypothetical protein.
       0.773
SKA88833.1
Hypothetical protein.
       0.773
SKA88844.1
Hypothetical protein.
       0.773
SKA88848.1
Bacteriophage head to tail connecting protein.
       0.773
SKA88853.1
Hypothetical protein.
       0.773
SKA88792.1
Hypothetical protein.
       0.714
Your Current Organism:
Prosthecobacter debontii
NCBI taxonomy Id: 48467
Other names: ATCC 700200, P. debontii, Prosthecobacter FC3, Prosthecobacter sp. FC-3, strain FC3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.