Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SKA76482.1 | SKA80871.1 | SAMN02745166_00182 | SAMN02745166_00691 | 23S rRNA (uracil1939-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | ATP-binding cassette, subfamily F, member 3. | 0.427 |
| SKA76482.1 | SKA92824.1 | SAMN02745166_00182 | SAMN02745166_01981 | 23S rRNA (uracil1939-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | tRNA-U20a,U20b-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.432 |
| SKA80871.1 | SKA76482.1 | SAMN02745166_00691 | SAMN02745166_00182 | ATP-binding cassette, subfamily F, member 3. | 23S rRNA (uracil1939-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.427 |
| SKA80871.1 | SKA92824.1 | SAMN02745166_00691 | SAMN02745166_01981 | ATP-binding cassette, subfamily F, member 3. | tRNA-U20a,U20b-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.537 |
| SKA92254.1 | SKA92822.1 | SAMN02745166_01864 | SAMN02745166_01979 | PAS domain S-box-containing protein. | ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain. | 0.978 |
| SKA92254.1 | SKA92824.1 | SAMN02745166_01864 | SAMN02745166_01981 | PAS domain S-box-containing protein. | tRNA-U20a,U20b-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.469 |
| SKA92254.1 | SKA98019.1 | SAMN02745166_01864 | SAMN02745166_02663 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
| SKA92822.1 | SKA92254.1 | SAMN02745166_01979 | SAMN02745166_01864 | ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain. | PAS domain S-box-containing protein. | 0.978 |
| SKA92822.1 | SKA92823.1 | SAMN02745166_01979 | SAMN02745166_01980 | ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain. | Lipopolysaccharide export system permease protein. | 0.709 |
| SKA92822.1 | SKA92824.1 | SAMN02745166_01979 | SAMN02745166_01981 | ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain. | tRNA-U20a,U20b-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.563 |
| SKA92822.1 | SKA98019.1 | SAMN02745166_01979 | SAMN02745166_02663 | ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain. | PAS domain S-box-containing protein. | 0.803 |
| SKA92823.1 | SKA92822.1 | SAMN02745166_01980 | SAMN02745166_01979 | Lipopolysaccharide export system permease protein. | ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain. | 0.709 |
| SKA92823.1 | SKA92824.1 | SAMN02745166_01980 | SAMN02745166_01981 | Lipopolysaccharide export system permease protein. | tRNA-U20a,U20b-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.610 |
| SKA92824.1 | SKA76482.1 | SAMN02745166_01981 | SAMN02745166_00182 | tRNA-U20a,U20b-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 23S rRNA (uracil1939-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.432 |
| SKA92824.1 | SKA80871.1 | SAMN02745166_01981 | SAMN02745166_00691 | tRNA-U20a,U20b-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | ATP-binding cassette, subfamily F, member 3. | 0.537 |
| SKA92824.1 | SKA92254.1 | SAMN02745166_01981 | SAMN02745166_01864 | tRNA-U20a,U20b-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | PAS domain S-box-containing protein. | 0.469 |
| SKA92824.1 | SKA92822.1 | SAMN02745166_01981 | SAMN02745166_01979 | tRNA-U20a,U20b-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain. | 0.563 |
| SKA92824.1 | SKA92823.1 | SAMN02745166_01981 | SAMN02745166_01980 | tRNA-U20a,U20b-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Lipopolysaccharide export system permease protein. | 0.610 |
| SKA92824.1 | SKA92825.1 | SAMN02745166_01981 | SAMN02745166_01982 | tRNA-U20a,U20b-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | UDP-N-acetylglucosamine 4,6-dehydratase (inverting). | 0.487 |
| SKA92824.1 | SKA92829.1 | SAMN02745166_01981 | SAMN02745166_01983 | tRNA-U20a,U20b-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase; Belongs to the DegT/DnrJ/EryC1 family. | 0.469 |
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