STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA93201.1Glycosyl transferase 4-like domain-containing protein. (397 aa)    
Predicted Functional Partners:
SKA93172.1
Rhamnosyltransferase.
 
 
  0.835
SKA93232.1
Transferase hexapeptide (six repeat-containing protein).
 
  0.815
SKA93198.1
PAS domain S-box-containing protein.
     
 0.774
SKA93188.1
Haem-NO-binding.
       0.773
SKA93123.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.740
SKA84623.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.713
SKA92533.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.685
SKA77023.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.681
SKA92506.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.669
SKA93110.1
Protein involved in polysaccharide export, contains SLBB domain of the beta-grasp fold.
  
    0.668
Your Current Organism:
Prosthecobacter debontii
NCBI taxonomy Id: 48467
Other names: ATCC 700200, P. debontii, Prosthecobacter FC3, Prosthecobacter sp. FC-3, strain FC3
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