STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA96127.1Hypothetical protein. (391 aa)    
Predicted Functional Partners:
SKA77639.1
4-hydroxybenzoate polyprenyltransferase.
   
 0.870
SKB07223.1
Hypothetical protein.
 
   
 0.803
SKA77635.1
3-dehydroquinate synthase.
 
     0.781
SKA91786.1
Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily.
 
     0.777
SKB06001.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
  
     0.730
SKA88774.1
Putative heme-binding domain-containing protein.
  
     0.713
SKA76380.1
Quinoprotein glucose dehydrogenase.
  
     0.712
SKA90874.1
Hypothetical protein.
  
     0.705
SKA77118.1
Putative membrane-bound dehydrogenase domain-containing protein.
  
     0.704
SKB06751.1
Putative membrane-bound dehydrogenase domain-containing protein.
  
     0.697
Your Current Organism:
Prosthecobacter debontii
NCBI taxonomy Id: 48467
Other names: ATCC 700200, P. debontii, Prosthecobacter FC3, Prosthecobacter sp. FC-3, strain FC3
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