STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA98296.1Protein of unknown function DUF58. (302 aa)    
Predicted Functional Partners:
SKA98289.1
Ca-activated chloride channel family protein.
 
    0.954
SKA98285.1
Ca-activated chloride channel family protein.
 
    0.947
SKA98282.1
Oxygen tolerance.
 
    0.934
SKA98300.1
MoxR-like ATPase.
    0.884
SKA98292.1
Protein of unknown function.
       0.773
SKA76216.1
Protein of unknown function DUF58.
  
     0.685
SKA82049.1
MoxR-like ATPase.
 
    0.522
SKB06733.1
MoxR-like ATPase.
 
    0.505
SKA98275.1
Hypothetical protein.
       0.458
SKA89284.1
MoxR-like ATPase.
 
    0.426
Your Current Organism:
Prosthecobacter debontii
NCBI taxonomy Id: 48467
Other names: ATCC 700200, P. debontii, Prosthecobacter FC3, Prosthecobacter sp. FC-3, strain FC3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.