STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA98311.1Planctomycete cytochrome C. (842 aa)    
Predicted Functional Partners:
SKA77500.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
  
 0.986
SKA98307.1
Protein of unknown function.
 
     0.923
SKA80575.1
Hypothetical protein.
  
 
  0.783
SKA76693.1
Protein of unknown function.
  
     0.775
SKA76802.1
Protein of unknown function.
  
     0.775
SKA78099.1
Protein of unknown function.
  
     0.775
SKA79950.1
Protein of unknown function.
  
     0.775
SKA81130.1
Protein of unknown function.
  
     0.775
SKA81186.1
Protein of unknown function.
  
     0.775
SKA86519.1
Protein of unknown function.
  
     0.775
Your Current Organism:
Prosthecobacter debontii
NCBI taxonomy Id: 48467
Other names: ATCC 700200, P. debontii, Prosthecobacter FC3, Prosthecobacter sp. FC-3, strain FC3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.