STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA98737.1Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family. (128 aa)    
Predicted Functional Partners:
SKA98741.1
Hypothetical protein.
    
 0.813
SKB06901.1
Hypothetical protein; Belongs to the GcvT family.
  
 
 0.765
SKB08998.1
Nitrogen fixation protein NifU.
 
  
 0.734
SKA98734.1
Molecular chaperone Hsp33.
  
    0.687
SKB00149.1
Nitrogen fixation protein NifU.
  
  
 0.686
SKA98731.1
Protein of unknown function.
   
   0.629
SKB07763.1
Cysteine desulfurase.
 
  
 0.606
SKB07607.1
Cysteine desulfurase.
 
  
 0.574
SKA97220.1
Fe-S cluster assembly protein SufB.
  
 
 0.498
SKA97235.1
Fe-S cluster assembly protein SufD.
  
 
 0.498
Your Current Organism:
Prosthecobacter debontii
NCBI taxonomy Id: 48467
Other names: ATCC 700200, P. debontii, Prosthecobacter FC3, Prosthecobacter sp. FC-3, strain FC3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.