STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA99592.1Putative membrane-bound dehydrogenase domain-containing protein. (926 aa)    
Predicted Functional Partners:
SKA77500.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
  
 0.986
SKA98490.1
Enterochelin esterase.
  
  
  0.915
SKB00875.1
Enterochelin esterase.
  
  
  0.880
SKA88370.1
Azurin.
  
  0.877
SKB05257.1
FG-GAP repeat-containing protein.
 
     0.837
SKA77924.1
Trehalose utilisation.
  
  
  0.792
SKA80331.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.788
SKA79958.1
Lysophospholipase L1.
 
     0.774
SKB08379.1
Trehalose utilisation.
  
  
  0.770
SKA88199.1
Cytochrome C oxidase, cbb3-type, subunit III.
 
 
  0.766
Your Current Organism:
Prosthecobacter debontii
NCBI taxonomy Id: 48467
Other names: ATCC 700200, P. debontii, Prosthecobacter FC3, Prosthecobacter sp. FC-3, strain FC3
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.