STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB00374.1Alcohol dehydrogenase. (374 aa)    
Predicted Functional Partners:
SKB03429.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.868
SKB00370.1
Acyl-CoA reductase.
 
 0.863
SKA80331.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.862
SKB00977.1
Acyl transferase domain-containing protein.
    
 0.851
SKA75952.1
Glutamate synthase (NADPH/NADH) large chain.
   
 
 0.848
SKA88506.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase.
  
 
 0.837
SKA85345.1
Uncharacterized zinc-type alcohol dehydrogenase-like protein.
  
 0.759
kdsB
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase); Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.
    
 0.753
SKA79884.1
Protocatechuate 3,4-dioxygenase beta subunit.
 
  
 0.515
SKA97808.1
NADP-dependent aldehyde dehydrogenase.
  
 0.481
Your Current Organism:
Prosthecobacter debontii
NCBI taxonomy Id: 48467
Other names: ATCC 700200, P. debontii, Prosthecobacter FC3, Prosthecobacter sp. FC-3, strain FC3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.