STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB01648.1Calcineurin-like phosphoesterase. (2953 aa)    
Predicted Functional Partners:
SKB01645.1
Hypothetical protein.
      0.773
SKB01651.1
Putative iron-regulated protein.
       0.773
SKB01655.1
CxxC motif-containing protein, DUF1111 family.
       0.689
SKA75996.1
Hypothetical protein.
  
     0.655
SKB04809.1
Transglutaminase-like superfamily protein.
  
     0.511
SKA84463.1
Cadherin domain-containing protein.
  
     0.496
SKA86577.1
Predicted acyltransferase, LPLAT superfamily.
  
     0.493
SKA86244.1
Calx-beta domain-containing protein.
  
     0.467
SKB02149.1
Calcineurin-like phosphoesterase.
  
     0.406
SKA99478.1
Hypothetical protein.
  
     0.405
Your Current Organism:
Prosthecobacter debontii
NCBI taxonomy Id: 48467
Other names: ATCC 700200, P. debontii, Prosthecobacter FC3, Prosthecobacter sp. FC-3, strain FC3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.