STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB02794.14-alpha-glucanotransferase. (512 aa)    
Predicted Functional Partners:
SKA90148.1
Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
 
 0.981
SKB01012.1
Maltooligosyl trehalose synthase.
 
 
 0.956
SKB01006.1
Maltose alpha-D-glucosyltransferase/ alpha-amylase.
  
 
 0.893
SKB05133.1
Glucose-1-phosphate adenylyltransferase.
 
  
 0.729
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 0.729
SKB01009.1
Maltooligosyl trehalose hydrolase.
 
 
 0.632
SKA99602.1
Phosphoglucomutase.
     
 0.573
SKB02790.1
Protein of unknown function.
       0.542
SKA82054.1
Glycogen operon protein; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.496
SKA82695.1
Glycogen operon protein; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.496
Your Current Organism:
Prosthecobacter debontii
NCBI taxonomy Id: 48467
Other names: ATCC 700200, P. debontii, Prosthecobacter FC3, Prosthecobacter sp. FC-3, strain FC3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.