STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB03141.1Putative ABC transport system ATP-binding protein. (234 aa)    
Predicted Functional Partners:
SKB08867.1
Putative ABC transport system permease protein.
 
 0.994
SKA94346.1
Putative ABC transport system permease protein.
 
  0.958
SKA76554.1
Putative ABC transport system permease protein.
 
 
  0.953
SKA98361.1
HlyD family secretion protein.
 
   0.812
SKB03139.1
Protein of unknown function.
       0.697
SKB04282.1
NitT/TauT family transport system ATP-binding protein.
 
      0.659
pstB
Phosphate transport system ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
    
0.618
SKA96345.1
Lipoprotein-releasing system permease protein.
 
  0.579
SKA97949.1
Predicted secreted hydrolase.
  
  0.579
SKB00988.1
Putative ABC transport system permease protein.
 
  0.566
Your Current Organism:
Prosthecobacter debontii
NCBI taxonomy Id: 48467
Other names: ATCC 700200, P. debontii, Prosthecobacter FC3, Prosthecobacter sp. FC-3, strain FC3
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