STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB03794.1PEP-CTERM protein-sorting domain-containing protein. (367 aa)    
Predicted Functional Partners:
SKA98172.1
Immunoglobulin I-set domain-containing protein; Belongs to the peptidase S8 family.
 
 
 0.850
SKA95114.1
PQQ-like domain-containing protein; Belongs to the peptidase S8 family.
 
 
 0.821
SKB04242.1
Nitrate reductase (quinol-dependent), transmembrane subunit.
  
  
  0.744
SKA77781.1
Protein of unknown function.
    
 0.725
SKB03791.1
Peroxiredoxin.
       0.723
SKA84211.1
NACHT domain-containing protein.
  
 
 0.715
SKA80666.1
GMP synthase (glutamine-hydrolysing).
    
  0.671
SKA86421.1
Repeat domain-containing protein.
 
 
  0.640
SKA79879.1
Putative Ig domain-containing protein; Belongs to the peptidase S8 family.
  
 
 0.628
SKA97276.1
FG-GAP repeat-containing protein.
 
 
  0.621
Your Current Organism:
Prosthecobacter debontii
NCBI taxonomy Id: 48467
Other names: ATCC 700200, P. debontii, Prosthecobacter FC3, Prosthecobacter sp. FC-3, strain FC3
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