STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB05427.1Protein of unknown function. (426 aa)    
Predicted Functional Partners:
SKB05428.1
SLA1 homology domain 1, SHD1.
 
     0.932
SKA92520.1
Protein of unknown function.
  
     0.775
SKB08034.1
Protein of unknown function.
  
     0.775
SKA90435.1
Planctomycete cytochrome C.
  
     0.774
SKA92754.1
Protein of unknown function.
  
     0.774
SKA98311.1
Planctomycete cytochrome C.
  
     0.774
SKA76684.1
Planctomycete cytochrome C.
  
     0.773
SKA79941.1
Planctomycete cytochrome C.
  
     0.773
SKA92779.1
Planctomycete cytochrome C.
  
     0.773
SKA98109.1
Planctomycete cytochrome C.
  
     0.773
Your Current Organism:
Prosthecobacter debontii
NCBI taxonomy Id: 48467
Other names: ATCC 700200, P. debontii, Prosthecobacter FC3, Prosthecobacter sp. FC-3, strain FC3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.