STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB06662.1Arylsulfatase A. (445 aa)    
Predicted Functional Partners:
SKB06652.1
Arylsulfatase A.
 
    
0.838
SKB06655.1
Sulfatase.
 
   
0.819
SKB06648.1
Arylsulfatase A.
 
    
0.735
SKB07170.1
Arylsulfatase A.
  
  
 
0.571
SKB04393.1
Arylsulfatase A.
  
  
 
0.567
SKB06670.1
Inorganic phosphate transporter, PiT family.
       0.558
SKB06673.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
       0.513
SKB04389.1
Arylsulfatase A.
  
  
 
0.491
SKA86231.1
Sulfatase.
  
  
 
0.490
SKA79623.1
YHYH protein.
 
      0.488
Your Current Organism:
Prosthecobacter debontii
NCBI taxonomy Id: 48467
Other names: ATCC 700200, P. debontii, Prosthecobacter FC3, Prosthecobacter sp. FC-3, strain FC3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.