STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB07348.1Acetyl esterase/lipase. (303 aa)    
Predicted Functional Partners:
SKB00944.1
Alpha/beta hydrolase fold.
  
     0.767
SKB00948.1
Alpha/beta hydrolase family protein.
  
     0.759
SKB03831.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
  
 
  0.700
SKA80666.1
GMP synthase (glutamine-hydrolysing).
    
  0.672
SKB00977.1
Acyl transferase domain-containing protein.
  
 0.652
SKA89033.1
Lysophospholipase L1.
  
 0.624
SKB02199.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
 
  0.599
SKB07345.1
Transposase IS116/IS110/IS902 family protein.
       0.586
SKB01019.1
Acetyl esterase/lipase.
  
     0.575
SKA92046.1
FAD dependent oxidoreductase.
 
 
  0.558
Your Current Organism:
Prosthecobacter debontii
NCBI taxonomy Id: 48467
Other names: ATCC 700200, P. debontii, Prosthecobacter FC3, Prosthecobacter sp. FC-3, strain FC3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.