STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB08010.1Type I restriction enzyme, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification. (1091 aa)    
Predicted Functional Partners:
SKA90252.1
N-6 DNA Methylase.
 
 
 0.996
SKA90269.1
Type I restriction enzyme, S subunit.
 
 
 0.995
SKB07995.1
Type I restriction enzyme M protein.
 
 
 0.951
SKB08013.1
Hypothetical protein.
 
   
 0.950
SKB07998.1
Type I restriction modification DNA specificity domain-containing protein.
 
  
 0.882
SKB07993.1
Hypothetical protein.
 
  
 0.871
SKB07930.1
Type I restriction enzyme M protein.
 
 
 0.855
SKB08001.1
Type I restriction enzyme, S subunit.
  
  
 0.855
SKB08007.1
Fic/DOC family protein.
       0.775
SKB07933.1
Type I restriction enzyme, S subunit.
  
  
 0.658
Your Current Organism:
Prosthecobacter debontii
NCBI taxonomy Id: 48467
Other names: ATCC 700200, P. debontii, Prosthecobacter FC3, Prosthecobacter sp. FC-3, strain FC3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.