STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFO1_0056SMART: cell division protein FtsA; KEGG: cell division protein FtsA. (712 aa)    
Predicted Functional Partners:
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.957
UFO1_2511
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
  
 
 0.881
UFO1_1119
PFAM: dehydratase medium subunit; KEGG: hypothetical protein.
  
 
 0.782
UFO1_2558
PFAM: type IV pilus assembly PilZ; KEGG: type IV pilus assembly PilZ.
 
     0.679
UFO1_2521
Putative PASTA sensor protein; TIGRFAM: stage V sporulation protein D; PFAM: penicillin-binding protein transpeptidase, Penicillin-binding protein dimerization domain-containing protein, PASTA domain containing protein; KEGG: stage V sporulation protein D; SMART: PASTA domain containing protein.
  
 
 0.677
sepF
Cell division protein sepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
  
 
 0.630
sepF-2
Cell division protein sepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
  
 
 0.630
UFO1_2560
TIGRFAM: flagellar biosynthetic protein FlhF; PFAM: GTP-binding signal recognition particle SRP54 G- domain-containing protein; KEGG: GTP-binding signal recognition particle SRP54 G-domain protein; SMART: GTP-binding signal recognition particle SRP54 G- domain-containing protein, AAA ATPase.
 
  
 0.630
UFO1_4368
PFAM: Protein of unknown function DUF2225; KEGG: hypothetical protein.
 
     0.611
UFO1_4326
PFAM: protein of unknown function DUF327; KEGG: hypothetical protein.
  
     0.607
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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