STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFO1_0221TIGRFAM: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase, HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: haloacid dehalogenase superfamily protein, phosphoserine phosphatase/2,3-diketo-5-methylthio-1-phosphopentane phosphatase. (217 aa)    
Predicted Functional Partners:
UFO1_1468
TIGRFAM: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase, HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: hypothetical protein.
  
  
 
0.905
UFO1_2836
KEGG: ribulose 1,5-bisphosphate carboxylase, large subunit; PFAM: ribulose bisphosphate carboxylase large chain.
  
  
 0.809
UFO1_0777
L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein; KEGG: araD, L-ribulose-5-phosphate 4-epimerase; SMART: class II aldolase/adducin family protein.
  
  
 0.466
rhaD
Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde.
  
  
 0.466
UFO1_2351
PFAM: class II aldolase/adducin family protein; KEGG: ribulose-5-phosphate 4-epimerase-like epimerase or aldolase; SMART: class II aldolase/adducin family protein.
  
  
 0.466
UFO1_2985
PFAM: class II aldolase/adducin family protein; KEGG: class II aldolase/adducin family protein; SMART: class II aldolase/adducin family protein.
  
  
 0.466
UFO1_3129
L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein; KEGG: L-ribulose-5-phosphate 4-epimerase; SMART: class II aldolase/adducin family protein.
  
  
 0.466
UFO1_4507
L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein; KEGG: araD, L-ribulose-5-phosphate 4-epimerase; SMART: class II aldolase/adducin family protein.
  
  
 0.466
UFO1_0222
Hypothetical protein.
       0.429
UFO1_4492
Methionine synthase; PFAM: homocysteine S-methyltransferase, Methionine synthase B12-binding module cap domain protein, dihydropteroate synthase DHPS, cobalamin B12-binding domain protein; KEGG: metH, methionine synthase; SMART: Methionine synthase B12-binding module cap domain protein.
  
    0.410
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.