STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFO1_0285PFAM: C4-dicarboxylate anaerobic carrier-like protein; KEGG: Dcu family anaerobic c4-dicarboxylate antiporter. (417 aa)    
Predicted Functional Partners:
UFO1_1859
KEGG: anaerobic C4-dicarboxylate transporter; TIGRFAM: anaerobic c4-dicarboxylate antiporter, Dcu family; PFAM: anaerobic c4-dicarboxylate membrane transporter.
  
   
 0.720
UFO1_0316
PFAM: nucleoside recognition domain protein; KEGG: hypothetical protein.
  
     0.703
UFO1_0317
PFAM: nucleoside recognition domain protein; KEGG: hypothetical protein.
  
     0.698
UFO1_0286
KEGG: hypothetical protein; PFAM: Capsule synthesis protein, CapA; SMART: Capsule synthesis protein, CapA.
 
     0.667
UFO1_1592
KEGG: putative carboxypeptidase; PFAM: peptidase M20, peptidase dimerization domain protein.
 
     0.603
UFO1_1932
PFAM: protein of unknown function DUF1292; KEGG: hypothetical protein.
  
     0.533
UFO1_2570
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
     0.533
UFO1_2805
KEGG: amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20, peptidase dimerization domain protein.
 
     0.501
UFO1_4586
KEGG: hypothetical protein.
  
     0.497
mprF
Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.
  
     0.491
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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