STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFO1_0860PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: thiF, molybdopterin/thiamine biosynthesis protein ThiF. (253 aa)    
Predicted Functional Partners:
UFO1_2070
KEGG: radical SAM protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
  
 
 0.586
thiG
Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
 
    0.540
UFO1_3339
Hypothetical protein; KEGG: Nucleoside phosphorylase-like protein.
 
    0.509
UFO1_1305
KEGG: thiamine biosynthesis protein ThiF; TIGRFAM: thiamine biosynthesis protein ThiF; PFAM: UBA/THIF-type NAD/FAD binding protein.
 
 
0.501
UFO1_3794
PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: moeB, molybdopterin biosynthesis protein MoeB.
 
 
0.492
UFO1_1935
PFAM: peptidase U32; KEGG: putative peptidase.
  
     0.444
UFO1_3700
TIGRFAM: metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain-containing protein; KEGG: rpfG5, cyclic di-GMP phosphodiesterase response regulator RpfG; SMART: metal-dependent phosphohydrolase HD region.
       0.428
UFO1_0861
KEGG: hypothetical protein.
  
    0.416
UFO1_1878
PFAM: peptidase U32, Peptidase U32, collagenase; KEGG: putative peptidase.
  
     0.405
UFO1_0862
PFAM: major facilitator superfamily MFS_1; KEGG: major facilitator superfamily protein.
       0.404
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.