STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFO1_1038PFAM: protein of unknown function DUF6 transmembrane; KEGG: Permease of the drug/metabolite transporter (DMT) superfamily. (114 aa)    
Predicted Functional Partners:
UFO1_4392
PFAM: protein of unknown function DUF6 transmembrane; KEGG: hypothetical protein.
     
  0.900
UFO1_1039
PFAM: acid phosphatase/vanadium-dependent haloperoxidase related protein; KEGG: acid phosphatase/vanadium-dependent haloperoxidase-like protein.
       0.750
UFO1_1040
KEGG: hypothetical protein.
       0.677
UFO1_1041
PFAM: Protein of unknown function DUF4127; KEGG: hypothetical protein.
       0.677
UFO1_1037
PFAM: UbiA prenyltransferase; KEGG: UbiA prenyltransferase; Belongs to the UbiA prenyltransferase family.
       0.579
UFO1_1036
KEGG: iron-containing alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase.
       0.550
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.