STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFO1_1396PFAM: PP-loop domain protein; KEGG: PP-loop domain protein; Belongs to the TtcA family. (261 aa)    
Predicted Functional Partners:
UFO1_0879
KEGG: selenocysteine lyase; PFAM: aminotransferase class V.
    
 0.716
UFO1_1302
KEGG: thiamine biosynthesis protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamine S protein.
  
 
 0.681
UFO1_3795
PFAM: thiamine S protein; KEGG: sulfur carrier protein ThiS.
  
 
 0.681
pth
Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
  
  
 0.594
metG
Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
     
 0.569
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
  
 0.518
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
  
 0.506
UFO1_0854
CoA-disulfide reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, pyridine nucleotide-disulfide oxidoreductase dimerization region, SirA-like domain-containing protein, FAD-dependent pyridine nucleotide-disulfide oxidoreductase, Rhodanese-like protein; KEGG: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; SMART: Rhodanese-like protein; Belongs to the sulfur carrier protein TusA family.
  
  
 0.503
UFO1_0047
KEGG: hypothetical protein.
  
 
 0.497
UFO1_3794
PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: moeB, molybdopterin biosynthesis protein MoeB.
 
 
 0.497
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.