STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFO1_1595KEGG: hypothetical protein. (296 aa)    
Predicted Functional Partners:
UFO1_3811
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; KEGG: xynA, glycosyl hydrolase/beta-1,4-xylanase; SMART: glycoside hydrolase family 10.
   
 
 0.623
UFO1_0273
PFAM: Protein of unknown function DUF2877; KEGG: hypothetical protein.
  
     0.595
UFO1_3612
KEGG: hypothetical protein.
  
     0.573
UFO1_0215
PFAM: Protein of unknown function DUF2625; KEGG: ybfH, protein.
  
     0.542
UFO1_0270
KEGG: hypothetical protein.
  
   
 0.540
UFO1_2116
PFAM: cyclic nucleotide-binding protein; KEGG: hypothetical protein.
  
     0.529
UFO1_1422
PFAM: regulatory protein TetR; KEGG: AcrR family transcriptional regulator.
  
    0.525
UFO1_3261
Hypothetical protein; KEGG: metal dependent phosphohydrolase.
  
     0.524
UFO1_1594
Hypothetical protein.
     
 0.479
UFO1_4129
Putative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; KEGG: RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; Belongs to the sigma-70 factor family. ECF subfamily.
  
   
 0.476
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.