STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFO1_1663Helix-turn-helix domain protein; KEGG: XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein. (147 aa)    
Predicted Functional Partners:
UFO1_1662
PFAM: protein of unknown function DUF955; KEGG: hypothetical protein.
 
  
 0.897
UFO1_1661
PFAM: integrase family protein; KEGG: integrase protein; Belongs to the 'phage' integrase family.
 
  
 0.686
UFO1_1664
PFAM: BetR domain protein.
       0.532
UFO1_1305
KEGG: thiamine biosynthesis protein ThiF; TIGRFAM: thiamine biosynthesis protein ThiF; PFAM: UBA/THIF-type NAD/FAD binding protein.
   
 
  0.489
UFO1_3794
PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: moeB, molybdopterin biosynthesis protein MoeB.
   
 
  0.489
UFO1_1302
KEGG: thiamine biosynthesis protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamine S protein.
     
  0.481
UFO1_3795
PFAM: thiamine S protein; KEGG: sulfur carrier protein ThiS.
     
  0.481
UFO1_1209
SMART: regulatory protein MarR; KEGG: MarR family transcriptional regulator.
  
 
 
 0.474
UFO1_4377
TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit; KEGG: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase.
     
  0.474
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
     
  0.474
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.