STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFO1_1801Monosaccharide-transporting ATPase; PFAM: ABC transporter related protein; KEGG: sugar ABC transporter ATPase; SMART: AAA ATPase. (512 aa)    
Predicted Functional Partners:
UFO1_1802
PFAM: ABC-type transporter, integral membrane subunit; KEGG: ribose/xylose/arabinose/galactoside ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 0.987
UFO1_1799
PFAM: Periplasmic binding protein domain; KEGG: putative ribose ABC transporter substrate-binding protein.
 
 0.961
UFO1_1800
PFAM: periplasmic lipoprotein; KEGG: periplasmic lipoprotein.
 
     0.821
UFO1_1264
PFAM: ABC-type transporter, integral membrane subunit; KEGG: monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
 0.794
UFO1_0896
PFAM: ABC-type transporter, integral membrane subunit; KEGG: sugar ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.788
UFO1_3458
PFAM: ABC-type transporter, integral membrane subunit; KEGG: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.784
UFO1_1327
PFAM: ABC-type transporter, integral membrane subunit; KEGG: sugar ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.772
UFO1_2993
PFAM: ABC-type transporter, integral membrane subunit; KEGG: rbsC, D-ribose ABC transporter permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.
 
 0.771
UFO1_0897
PFAM: ABC-type transporter, integral membrane subunit; KEGG: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.770
UFO1_0642
PFAM: ABC-type transporter, integral membrane subunit; KEGG: monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.763
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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