STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFO1_1816Transcriptional regulator, LysR family; PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: transcriptional regulator. (285 aa)    
Predicted Functional Partners:
UFO1_1756
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator.
  
     0.774
UFO1_0287
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR, LysR substrate-binding protein; KEGG: LysR family transcriptional regulator.
  
     0.772
UFO1_3366
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR, LysR substrate-binding protein; KEGG: LysR family transcriptional regulator.
  
     0.761
UFO1_1171
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator.
  
     0.735
UFO1_3943
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR, LysR substrate-binding protein; KEGG: LysR family transcriptional regulator.
  
     0.643
UFO1_1817
PFAM: protein of unknown function DUF6 transmembrane; KEGG: hypothetical protein.
  
    0.536
UFO1_1815
PFAM: protein of unknown function DUF6 transmembrane; KEGG: DMT(drug/metabolite transporter) superfamily permease.
  
    0.520
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.