STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFO1_1855PFAM: Protein of unknown function DUF3343; KEGG: hypothetical protein. (90 aa)    
Predicted Functional Partners:
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
       0.798
UFO1_1854
KEGG: selenium metabolism protein YedF; TIGRFAM: selenium metabolism protein YedF; PFAM: SirA-like domain-containing protein, DsrE family protein; Belongs to the sulfur carrier protein TusA family.
     
 0.795
UFO1_1851
Hypothetical protein; KEGG: xanthine dehydrogenase accessory factor.
     
 0.708
UFO1_1852
PFAM: XshC-Cox1-family protein; KEGG: hypothetical protein.
     
 0.708
UFO1_1848
TIGRFAM: selenium-dependent molybdenum hydroxylase 1; PFAM: [2Fe-2S]-binding domain-containing protein, aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein, ferredoxin, aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: selenium-dependent molybdenum hydroxylase 1; SMART: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead.
     
 0.570
UFO1_1849
TIGRFAM: Conserved hypothetical protein CHP03172; KEGG: hypothetical protein.
     
 0.520
UFO1_1850
PFAM: MobA-like NTP transferase domain; KEGG: hypothetical protein.
     
 0.520
UFO1_1856
Xenobiotic-transporting ATPase; PFAM: ABC transporter transmembrane region, ABC transporter related protein; KEGG: yfiB, ABC transporter ATP-binding protein/permease; SMART: AAA ATPase.
       0.441
UFO1_1857
Xenobiotic-transporting ATPase; PFAM: ABC transporter transmembrane region, ABC transporter related protein; KEGG: yfiC, ABC transporter ATP-binding protein/permease; SMART: AAA ATPase.
       0.441
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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