STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFO1_2108KEGG: stage V sporulation protein AD; TIGRFAM: stage V sporulation protein AD; PFAM: Stage V sporulation AD family protein. (333 aa)    
Predicted Functional Partners:
UFO1_2107
KEGG: sporulation stage V, protein AC; TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein.
 
  
 0.976
UFO1_2109
KEGG: sporulation stage V, protein AE; TIGRFAM: stage V sporulation protein AE; PFAM: SpoVA protein.
 
  
 0.962
UFO1_2106
PFAM: protein of unknown function DUF421, protein of unknown function DUF1657; KEGG: hypothetical protein.
 
  
 0.946
UFO1_2105
PFAM: protein of unknown function DUF1657; KEGG: Protein of unknown function (DUF1657).
 
     0.897
UFO1_1978
KEGG: stage V sporulation protein AC; TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein.
 
  
 0.896
UFO1_2717
PFAM: peptidase M63 germination protease; TIGRFAM: spore protease; KEGG: spore protease; HAMAP : Germination protease.
  
  
 0.887
UFO1_1980
KEGG: stage V sporulation protein AE; TIGRFAM: stage V sporulation protein AE; PFAM: SpoVA protein.
 
  
 0.867
UFO1_1984
PFAM: GerA spore germination protein; KEGG: spoVAF, Stage V sporulation protein AF (SpoVAF).
 
  
 0.853
UFO1_2110
PFAM: protein of unknown function DUF1657; KEGG: Protein of unknown function (DUF1657).
 
     0.811
UFO1_0469
TIGRFAM: stage V sporulation protein T, transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein; KEGG: spoVT, stage V sporulation protein T; SMART: SpoVT/AbrB domain-containing protein.
  
   
 0.799
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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