STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFO1_2663Sulfate-transporting ATPase; PFAM: ABC transporter related protein; KEGG: znuC, high-affinity zinc uptake system ATP-binding protein ZnuC; SMART: AAA ATPase. (241 aa)    
Predicted Functional Partners:
UFO1_2662
PFAM: ABC-type transporter, integral membrane subunit; KEGG: ABC transporter.
 
 0.999
UFO1_1025
PFAM: ABC-type metal ion transporter, periplasmic subunit; KEGG: adcA, zinc-binding lipoprotein adca; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.994
UFO1_2664
PFAM: ferric-uptake regulator; KEGG: ferric uptake regulator, fur family; Belongs to the Fur family.
  
  
 0.896
cysS
KEGG: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase/mycothiol ligase, Cysteinyl-tRNA synthetase class Ia DALR; TIGRFAM: cysteinyl-tRNA synthetase; HAMAP : Cysteinyl-tRNA synthetase; SMART: Cysteinyl-tRNA synthetase class Ia DALR; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
     0.641
UFO1_1388
KEGG: FeoA family protein; PFAM: FeoA family protein; SMART: FeoA family protein.
  
  
 0.595
dnaK
Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
   
 0.594
UFO1_2665
Xenobiotic-transporting ATPase; PFAM: ABC transporter transmembrane region, ABC transporter related protein; KEGG: msbA, putative lipid A export ATP-binding/permease protein MsbA; SMART: AAA ATPase.
 
   
0.568
UFO1_0068
PFAM: ferric-uptake regulator; KEGG: ferric uptake regulator, Fur family; Belongs to the Fur family.
  
  
 0.541
UFO1_3295
KEGG: chaperone DnaJ domain-containing protein; PFAM: heat shock protein DnaJ domain protein, chaperone DnaJ domain protein; SMART: heat shock protein DnaJ domain protein.
 
 
 
 0.539
UFO1_1504
KEGG: thioredoxin-disulfide reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain.
  
     0.537
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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