STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFO1_2726KEGG: membrane signaling protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein. (410 aa)    
Predicted Functional Partners:
UFO1_3891
KEGG: response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
 
 
 0.776
UFO1_2725
PFAM: PBP domain; KEGG: ABC transporter substrate-binding protein.
       0.773
UFO1_0459
KEGG: response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
 
     0.748
UFO1_0203
Two component, sigma54 specific, transcriptional regulator, Fis family; KEGG: acetoacetate metabolism regulatory protein AtoC; PFAM: sigma-54 factor interaction domain-containing protein, response regulator receiver, helix-turn-helix Fis-type; SMART: response regulator receiver, AAA ATPase.
 
 
 0.743
UFO1_0473
KEGG: two component transcriptional regulator, winged helix family; PFAM: response regulator receiver, transcriptional regulator domain-containing protein; SMART: response regulator receiver, transcriptional regulator domain-containing protein.
 
 
 
 0.691
UFO1_0955
KEGG: integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein.
  
 
 
 0.684
UFO1_1628
KEGG: cheY, chemotaxis protein CheY; PFAM: response regulator receiver; SMART: response regulator receiver.
 
 
 0.681
UFO1_1028
KEGG: response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
 
 
 0.679
UFO1_4394
KEGG: integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein.
  
 
 
 0.673
UFO1_4332
Diguanylate cyclase with PAS/PAC and GAF sensor; TIGRFAM: diguanylate cyclase, PAS sensor protein; PFAM: GGDEF domain containing protein, response regulator receiver; KEGG: PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase; SMART: GGDEF domain containing protein, response regulator receiver, GAF domain protein, PAC repeat-containing protein, PAS domain containing protein.
 
 
 
 0.665
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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