STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFO1_2771KEGG: D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein, FAD linked oxidase domain-containing protein. (460 aa)    
Predicted Functional Partners:
UFO1_2772
CoB--CoM heterodisulfide reductase; KEGG: hypothetical protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein, 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein.
 
 0.996
UFO1_0707
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein, 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein; KEGG: Fe-S oxidoreductase.
 
 0.982
UFO1_4022
KEGG: glpC, putative anaerobic glycerol-3-phosphate dehydrogenase subunit C; TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
  
 0.958
UFO1_1192
PFAM: Catalase domain protein; KEGG: catalase; SMART: Catalase domain protein; Belongs to the catalase family.
   
 0.920
UFO1_0400
KEGG: aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
  
 0.919
UFO1_2816
D-lactate dehydrogenase (cytochrome); KEGG: glycolate oxidase; PFAM: FAD linked oxidase domain-containing protein, FAD linked oxidase domain protein.
  
  
 
0.917
UFO1_0889
KEGG: glyoxylate reductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein, D-isomer specific 2-hydroxyacid dehydrogenase catalytic region-containing protein.
   
 0.915
UFO1_0364
KEGG: glyoxylate reductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein, D-isomer specific 2-hydroxyacid dehydrogenase catalytic region-containing protein.
  
 
 0.910
UFO1_1073
D-lactate dehydrogenase (cytochrome); KEGG: fad/fmn-containing dehydrogenase; PFAM: FAD linked oxidase domain protein, FAD linked oxidase domain-containing protein.
  
  
 
0.910
UFO1_0213
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; KEGG: haloacid dehalogenase-like family hydrolase.
    
 0.909
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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