STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFO1_2883PFAM: ABC-type transporter, integral membrane subunit; KEGG: nitrate/sulfonate/bicarbonate ABC transporter permease. (339 aa)    
Predicted Functional Partners:
UFO1_2882
Taurine-transporting ATPase; PFAM: ABC transporter related protein; KEGG: nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein; SMART: AAA ATPase.
  
 0.972
UFO1_2881
SMART: ABC-type transporter, periplasmic subunit family 3; KEGG: nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein.
 
  
 0.953
UFO1_2822
Taurine-transporting ATPase; PFAM: ABC transporter related protein; KEGG: nitrate/sulfonate/bicarbonate ABC transporter ATPase; SMART: AAA ATPase.
  
 0.871
UFO1_2872
Taurine-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase.
  
 0.868
UFO1_1624
Taurine-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ABC transporter related; SMART: AAA ATPase.
  
 0.867
UFO1_1132
Taurine-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ssuB3, aliphatic sulfonates ABC transporter ATP-binding protein SsuB; SMART: AAA ATPase.
  
 0.866
UFO1_2873
Hypothetical protein; KEGG: nitrate/sulfonate/bicarbonate ABC transporter.
 
  
 0.852
ssuB
Taurine-transporting ATPase; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
  
 0.851
UFO1_2820
SMART: ABC-type transporter, periplasmic subunit family 3; KEGG: ssuA, nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein.
 
  
 0.849
UFO1_1131
TIGRFAM: aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein; KEGG: ssuA3, aliphatic sulfonates ABC transporter substrate-binding protein SsuA.
 
  
 0.825
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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