STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFO1_3073TIGRFAM: methylaspartate ammonia-lyase; KEGG: methylaspartate ammonia-lyase; PFAM: Methylaspartate ammonia-lyase, C-terminal, Methylaspartate ammonia-lyase, N-terminal. (416 aa)    
Predicted Functional Partners:
glmE
Methylaspartate mutase, E subunit; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).
 
  
 0.991
glmS-2
Methylaspartate mutase S chain; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).
 
  
  0.990
UFO1_3072
KEGG: hypothetical protein.
 
     0.912
UFO1_3075
KEGG: mutL2, glutamate mutase; TIGRFAM: Conserved hypothetical protein CHP01319, GlmL; PFAM: Conserved hypothetical protein CHP01319, GlmL.
 
     0.907
UFO1_3077
KEGG: GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
 
     0.692
UFO1_3068
Citrate lyase ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.
 
     0.542
UFO1_3071
Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.
 
     0.503
UFO1_3423
KEGG: hypothetical protein.
  
     0.471
citG-2
2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase; PFAM: triphosphoribosyl-dephospho-CoA protein, Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase CitG, holo-ACP synthase CitX; HAMAP : 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase; KEGG: 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase.
 
     0.447
UFO1_3069
TIGRFAM: citrate lyase, alpha subunit; KEGG: citrate lyase subunit alpha; PFAM: Citrate lyase alpha subunit.
       0.434
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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